fsl 4.0.4-1 source package in Ubuntu

Changelog

fsl (4.0.4-1) unstable; urgency=low

  * New bugfix release.
  * Install missing IRTK configuration, which are not covered by the IRTK
    liccense.

fsl (4.0.3-2) unstable; urgency=low

  * Applied upstream patch to fix some problems with boolean commandline
    options.

fsl (4.0.3-1) unstable; urgency=low

  * New upstream release. Some bugfixes in bet2 and possum.
  * Removed all fftw-related stuff from the build-dependencies. Apparently it
    is not necessary anymore. Thanks to Paul Brossier for reporting
    (Closes: #460270).

fsl (4.0.2-3) unstable; urgency=low

  * Fixed some bugs for GCC 4.3 compatibility.
  * Updated build-dependencies for libnifti transition.

fsl (4.0.2-2) unstable; urgency=low

  * Refurbished debian/rules. Now honours 'noopt' and builds with debugging
    symbols by default.
  * Make Debian diff less intrusive by moving more logic into debian/rules.
  * Improve LD_LIBRARY_PATH handling by preventing trailing colons.
  * Let fsl-doc depend on fslview-doc to prevent dangling symlink.
  * Fixed location of lintian override.
  * Updated and completed list of licenses in debian/copyright.
  * Removed empty directories from the fsl-doc package.
  * Placed fsl-doc package in section non-free/doc.
  * Bumped Standard version to 3.7.3 -- no changes necessary.

fsl (4.0.2-1) unstable; urgency=low

  * New upstream bugfix release.
    - Susan: multiple performance improvements
    - SienaX: bugfix in sienax regarding the -lm option
    - Avwutils: minor fixes to fslmaths and fslsplit
    - Feat5: multiple minor fixes
    - Film: minor fix
    - Flame: bugfix in the multiple-group-variances estimation
    - Fdt: minor changes and fixes
    - Miscvis: fixed Renderstats gui
  * Use new-style Homepage field in debian/control.
  * Replace deprecated 'Source-Version' substvar with 'source:Version' in
    debian/control.
  * Removed executable permissions from all '.gif' files.

fsl (4.0.1-3) unstable; urgency=low

  * Added bc and dc to the dependencies.
  * Adjusted package build-deps to new libfftw3-dev package in Debian lenny.

fsl (4.0.1-2) unstable; urgency=low

  * Added a lintian override for the Runtcl syntax warning. This file is
    actually a mixed sh and tclsh script.

fsl (4.0.1-1) unstable; urgency=low

  * New upstream bugfix release.
  * BET can now store the brain surface in VTK format.

fsl (4.0.0-2) unstable; urgency=low

  * Bugfix: fsl_sub made use of non-POSIX operator while interpreter was set
    to /bin/sh. This caused the script to fail on Ubuntu systems that have
    dash as their default shell.

fsl (4.0.0-1) unstable; urgency=low

  * New upstream release.
  * Repackaged the FSL source tarball due to its size and the mixture of
    licenses and split it into three independent source packages: 'fsl' contains
    all non-free source code, 'fslview' contains FSLView and all other
    DFSG-compliant sources and 'fsldata' contains the arch-independent datasets
    (>900MB).
  * Conflict with old fsl-fslview package and depend on the successor
    'fslview'.
  * Debian diff is now handled with a GIT repository. Build-dependency to
    dpatch is obsolete.
  * All internal libraries are compiled as shared libraries with
    -W,l--no-undefined to be able to detect unresolved symbols that have been
    an issue in the past. This also reduces the size of the binary package
    significantly.
  * FSL now uses libfslio, libniftiio and the im* tools from the corresponding
    Debian packages instead of a compiling a local copy.
  * Added 'dicomnifti' to the list of the suggested packages.
  * Removed obsolete runtime dependency to tix, imagemagick and gnuplot.

fsl (3.3.11-2) unstable; urgency=low

  * Removed manpage links of FSL internal cmdline tools to prevent namespace
    conflicts.
  * Disabled FSL developer variables in /etc/fsl/fsl.conf to prevent error
    messages when the file is sourced, but no compiler is installed.
  * Added wrapper script (similar to ssh-argv0) to be able to automatically
    source the FSL configuration on startup. This adds the opportunity to
    include menu and .desktop files.
  * Add proper menu and .desktop files for all FSL GUI applications.
  * Added build-depend on imagemagick to be able to generate a 32x32 icon for
    the FSL menu entries from included artwork.
  * Renamed fsl config file from fsl.conf to fsl.sh. This is done to reduce
    the differences between upstream releases and the Debian package.
    A preinst script was added to move old config files on package upgrades.
    The new behavior is noted in debian/NEWS.
  * Added XS-Vcs-Svn and XS-Vcs-Browser to debian/control.
  * Added comments about the CEPHES and Susan licensing to debian/copyright.
  * Added a link to the FSLView binary to /usr/share/fsl/bin, because Nudge
    was complaining about not beeing able to find it. Thanks to Yaroslav
    Halchenko for pointing at this issue.
  * Added manpage for fslview.

fsl (3.3.11-1) unstable; urgency=low

  * New upstream release. Fixes another minor randomize bug.

fsl (3.3.10-1) unstable; urgency=low

  * New upstream release. Fixes a bug in randomise.

fsl (3.3.9-1) unstable; urgency=low

  * New upstream release.

fsl (3.3.8-1) unstable; urgency=low

  * New upstream release.
  * Minor bugfixes fixes to avwmerge++ and avwmaths++.
  * Modified FSLView makefile to fix FTBFS due to missing fslio linrary.
  * Added debian/backports to the source package. It contains a patch that
    disables the fslview package when backporting to sarge using pbuilder-ssh.

fsl (3.3.7-3) unstable; urgency=low

  * Added missing changelog entries for 3.3.7-2.
  * Renamed the fsl-sbrain package to fsl-data.
  * Added missing licenses to debian/copyright.
  * Moved default FEAT configuration to /etc/fsl.
  * Temporarily added libvtk5-qt3 to the build-depends to work-around
    bug #389521.

fsl (3.3.7-2) unstable; urgency=low

  * Include FSLView docs in the fsl-doc package.
  * Added patch to fix FTBFS due to an issue with template instantiation.
    Thanks to Yaroslav Halchenko.
  * Minor enhancement for FSLView compilation (force Qt3 with Qt4 also
    present).
  * Fixed missing example_FA_target in $FSLDIR/etc/standard.

fsl (3.3.7-1) unstable; urgency=low

  * New upstream release.
  * Added FSLView package.

fsl (3.3.6-2) unstable; urgency=low

  * Bumped Standards-Version to 3.7.2; no changes necessary.

fsl (3.3.6-1) unstable; urgency=low

  * New upstream release.

fsl (3.3.5-2) unstable; urgency=low

  * Added patch for gcc4.1 compatibility (Thanks to Mark Jenkinson).

fsl (3.3.5-1) unstable; urgency=low

  * New upstream release

fsl (3.3.4-1) unstable; urgency=low

  * New upstream release (missed 3.3.3). FSLView source code is now included,
    but FSLView still cannot be build, because it build-depends on VTK 5.0.
    No Debian package of this version is currently available.
  * Added build conflict to libnifti0-dev. FSL sources contain an incompatible
    fork of this library. This situation should vanish with the next major
    release.

fsl (3.3.2-1) unstable; urgency=low

  * New upstream release.
  * Moved all binaries to /usr/lib/fsl after experiencing name clashes with
    other packages.

fsl (3.3.0-1) unstable; urgency=low

  * New upstream version.
  * Split standard space brain data into a separate package.
  * Made matlab m-files available for Octave.

fsl (3.2beta-4) unstable; urgency=low

  * Added the possibility to define additional compiler flags for
    arch-dependend optimization by defining them in the DEB_ARCH_OPT_FLAGS
    environment variable.

fsl (3.2beta-3) unstable; urgency=low

  * Split the dpatch patches into several smaller parts.
  * Added patches to replace most of the deprecated headers.
  * Improved patch to FAST for GCC4 compatiility.
  * Removed libcprob and newran from the tarball, since they are unnecessary
    for building FSL.
  * Added patch to libvis that makes it possible to use a dependency to the
    official Debian libgdchart-gd2 package instead of compiling the custom
    version from the FSL source tarball.
  * Switch package dependency for newmat to a package that provides a shared
    library (Thanks to Philippe Coval).

fsl (3.2beta-2) unstable; urgency=low

  * Added build-dependency to libnewmat10-dev and stopped compiling the
    included version.

fsl (3.2beta-1) unstable; urgency=low

  * Initial Release (Closes: #332666).
  * Upstream tarball was repackaged, because it contained lots of binaries of
    software available as proper Debian packages (see get-orig-source target
    in debian/rules).
  * Includes some fixes for compatibility with GCC4 (thanks to Andre Piel).

 -- Ubuntu Archive Auto-Sync <email address hidden>   Thu,  26 Jun 2008 10:10:41 +0100

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Uploaded by:
Ubuntu Archive Auto-Sync
Uploaded to:
Intrepid
Original maintainer:
Michael Hanke
Architectures:
any
Section:
science
Urgency:
Low Urgency

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File Size SHA-256 Checksum
fsl_4.0.4.orig.tar.gz 12.2 MiB 772004c386c7e24e8f3b02eeedf2992eda77ac8b1a6240403d89e56bfe3f2b2b
fsl_4.0.4-1.diff.gz 23.2 KiB 1e22b62f0992b1e2a178ad53b3ab41ecc914f53062d0d8476002ec57c6d37285
fsl_4.0.4-1.dsc 1.4 KiB dc0901a4d3550fb4efec64fd256da9fd7dfad41562d82e2af2bb80e24fee8b28

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